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Video Game Provides Framework For Solving Genomic Sequence Alignment Problems

gene-puzzle-game

Over the past year our genetic understanding of diseases such as Alzheimer’s, diabetes and cancer has been accelerated by thousands of video gamers thanks to an online flash game called Phylo. Phylo is a video game created by Dr. Jérôme Waldispuhl of the McGill Centre for BioInformatics and collaborator Mathieu Blanchette. The game itself is a framework for solving the common problem of multiple sequence alignments in comparative genomics and leverages the visual problem solving skills of online gamers.

The Phylo website explains the background to game: Read more »

*This blog post was originally published at Medgadget*

Do Doctors Feel That They Need Permission To Share Ideas?

Let’s say you’re a doctor and you have an idea, opinion, or a new way of doing things.  What do you do with it?

It used to be that the only place we could share ideas was in a medical journal or from the podium of a national meeting.  Both require that your idea pass through someone’s filter.  As physicians we’ve been raised to seek approval before approaching the microphone.

This is unfortunate.  When I think about the doctors around me, I think about the remarkable mindshare that exists.  Each is unique in the way they think.  Each sees disease and the human condition differently.  But for many their brilliance and wisdom is stored away deep inside.  They are human silos of unique experience and perspective.  They are of a generation when someone else decided if their ideas were worthy of discussion.  They are of a generation when it was understood that few ideas are worthy of discussion.  They are the medical generation of information isolation.

I spoke with a couple of students recently about Read more »

*This blog post was originally published at 33 Charts*

Why Did The USPSTF Change The Pap Test Guidelines For Women?

Women have been told they should have screening for cervical cancer with a pap test every year.  The visit to the gynecologist or internal medicine physician has been a right of passage for most young women and most are very compliant with that annual visit throughout their lives.

Well, the times they are a-changin’ because new guidelines issued by the US Preventative Services Task Force and the American Cancer Society say women should undergo screening NO MORE OFTEN than every 3 years starting at age 21.  To further strengthen this recommendation, even the American Society for Clinical Pathology (those folks that read the pap smears) agrees with the recommendation.  They also recommend stopping routine pap smears after age 65 for women who have had 3 negative Pap test results in the past 10 years.  These women are just not at high risk.

So why the change? Read more »

*This blog post was originally published at EverythingHealth*

Apps Allow Viewer To Study 3-D Details Of Human Anatomy

I remember when I had to study all the details of human anatomy from textbooks and some old books with many pictures, but I didn’t have a chance to see things in 3D (which would have made it much easier to understand, learn and memorize). After medical school, I started to discover new apps and solutions for this problem.

I’ve been using the Biodigital app on Google Chrome, it’s free but a bit hard to use.

And recently, Read more »

*This blog post was originally published at ScienceRoll*

How Can We Interpret The Conflicting Messages From The Media Regarding Research?

I’m choosing to blog about a HealthDay story headlined, “British Study Suggests Mammograms Do More Harm Than Good,” rather than do one of our criteria-driven systematic story reviews because our criteria don’t address the bigger picture.

And that bigger picture is this:

In a criteria-driven, systematic story review of another HealthDay story about a Dutch study this week headlined, “Mammograms Cut Risk of Breast Cancer Death by Half, Study Finds,” our review team commented: Read more »

*This blog post was originally published at Health News Review*

Latest Interviews

IDEA Labs: Medical Students Take The Lead In Healthcare Innovation

It’s no secret that doctors are disappointed with the way that the U.S. healthcare system is evolving. Most feel helpless about improving their work conditions or solving technical problems in patient care. Fortunately one young medical student was undeterred by the mountain of disappointment carried by his senior clinician mentors…

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How To Be A Successful Patient: Young Doctors Offer Some Advice

I am proud to be a part of the American Resident Project an initiative that promotes the writing of medical students residents and new physicians as they explore ideas for transforming American health care delivery. I recently had the opportunity to interview three of the writing fellows about how to…

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Latest Book Reviews

Book Review: Is Empathy Learned By Faking It Till It’s Real?

I m often asked to do book reviews on my blog and I rarely agree to them. This is because it takes me a long time to read a book and then if I don t enjoy it I figure the author would rather me remain silent than publish my…

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The Spirit Of The Place: Samuel Shem’s New Book May Depress You

When I was in medical school I read Samuel Shem s House Of God as a right of passage. At the time I found it to be a cynical yet eerily accurate portrayal of the underbelly of academic medicine. I gained comfort from its gallows humor and it made me…

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Eat To Save Your Life: Another Half-True Diet Book

I am hesitant to review diet books because they are so often a tangled mess of fact and fiction. Teasing out their truth from falsehood is about as exhausting as delousing a long-haired elementary school student. However after being approached by the authors’ PR agency with the promise of a…

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